miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|84408787|gb|DW249240.1|DW249240 CCCGGGACTGCGGGTGTACTGGGCGGCTTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGCTTCAT
AAAGAACGCTGCTGCTGGTTACTATGCCAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGTTTG
AGGGTCCAATTCTTCTGCCCCCGGAAGAGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTTGAG
AAAAAGATTCGCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGAGCT
GGATGGTGAGACTGTGATGCGTGCAGATCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACAAGA
CATACACGCAGGCTCTTCCATACTTTGACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTGGCT
GTGGAGAAACTGCTCGGCCTGGAGGCTCCCATCAGGGCCAAGTACATCCGTACCATGTTTGCTGAGGTTACACGCATCTT
GAATCACTGCATGTTCTTGGGGGCTCACGCTATGGATGTGGGCGCCCTCACTCCTTTCCTGTGGCTCTTTGAGGAACGTG
AGAAGATGATGGAGTTCTATGAGAGAGCTTCTGGTGCTCGCCTT




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  276 bits (705), Expect = 1e-73
 Identities = 126/186 (67%), Positives = 150/186 (80%)
 Frame = +1

Query: 127 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 306
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 307 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 486
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 487 KLLGLEAPIRAKYIRTMFAEVTRILNHCMFLGAHAMDVGALTPFLWLFEEREKMMEFYER 666
           KLL +  P RA++IR +F E+TR+LNH M +  HA+D+GA+TPF WLFEEREKM EFYER
Sbjct: 157 KLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216

Query: 667 ASGARL 684
            SGAR+
Sbjct: 217 VSGARM 222